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Aliases : GIF3
Description : cofactor component *(GIF) of GRF-GIF transcriptional complex
Gene families : OG0016684 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_50160.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_214 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003746 | translation elongation factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003924 | GTPase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005787 | signal peptidase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006465 | signal peptide processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006801 | superoxide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006848 | pyruvate transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015711 | organic anion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015849 | organic acid transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0019866 | organelle inner membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0019867 | outer membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030118 | clathrin coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0031090 | organelle membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0031966 | mitochondrial membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0031968 | organelle outer membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043461 | proton-transporting ATP synthase complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046942 | carboxylic acid transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0072546 | EMC complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901475 | pyruvate transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1905368 | peptidase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007726 | SS18_N | 88 | 141 |
| No external refs found! |