Lsat_1_v5_gn_9_48840.1 (ZFN1, PNT1)


Aliases : ZFN1, PNT1

Description : regulatory protein of RNA homeostasis


Gene families : OG0034644 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_48840.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_177


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004325 ferrochelatase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006783 heme biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016559 peroxisome fission IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042168 heme metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046422 violaxanthin de-epoxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 144 168
IPR000571 Znf_CCCH 52 77
IPR000571 Znf_CCCH 97 122
IPR000571 Znf_CCCH 274 299
IPR000571 Znf_CCCH 320 345
No external refs found!