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Aliases : HMGB3, NFD03, NFD3
Description : DNA bending architectural protein *(HMG-B)
Gene families : OG0035613 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_45381.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_160 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003896 | DNA primase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006259 | DNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006260 | DNA replication | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006270 | DNA replication initiation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006275 | regulation of DNA replication | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032392 | DNA geometric change | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032508 | DNA duplex unwinding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032780 | negative regulation of ATP-dependent activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033043 | regulation of organelle organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0034061 | DNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0042555 | MCM complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043086 | negative regulation of catalytic activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043462 | regulation of ATP-dependent activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044092 | negative regulation of molecular function | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0045275 | respiratory chain complex III | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048478 | obsolete replication fork protection | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051095 | regulation of helicase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051097 | negative regulation of helicase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051276 | chromosome organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0070069 | cytochrome complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0070469 | respirasome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071103 | DNA conformation change | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0098803 | respiratory chain complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1905462 | regulation of DNA duplex unwinding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1905463 | negative regulation of DNA duplex unwinding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1905774 | regulation of DNA helicase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1905775 | negative regulation of DNA helicase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990351 | transporter complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009071 | HMG_box_dom | 32 | 101 |
| No external refs found! |