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  5. Lsat_1_v5_gn_9_36021.1

Lsat_1_v5_gn_9_36021.1 (LMCO4, IRX12, LAC4, ATLMCO4)


Aliases : LMCO4, IRX12, LAC4, ATLMCO4

Description : lignin laccase. EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG0009089 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_36021.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_44


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011707 Cu-oxidase-like_N 33 143
IPR001117 Cu-oxidase_2nd 157 305
IPR011706 Cu-oxidase_C 408 515
No external refs found!