Lsat_1_v5_gn_9_33601.1 (NOT3)

Aliases : NOT3

Description : not classified

Gene families : OG0005357 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005357_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_33601.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_88

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_1_45160.1	NOT3	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004652	obsolete polynucleotide adenylyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019751	polyol metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034311	diol metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034312	diol biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043631	obsolete RNA polyadenylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046173	polyol biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007207	Not_N	223	281

External Links

No external refs found!