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  5. Lsat_1_v5_gn_9_30620.1

Lsat_1_v5_gn_9_30620.1 (AtABCA1, ABCA1)


Aliases : AtABCA1, ABCA1

Description : subfamily ABCA transporter


Gene families : OG0000139 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_30620.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_106


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000226 microtubule cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006665 sphingolipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006672 ceramide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009439 cyanate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051179 localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070652 HAUS complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990316 Atg1/ULK1 kinase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 477 620
IPR003439 ABC_transporter-like_ATP-bd 1379 1521
No external refs found!