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Aliases : EMB2654
Description : trans-splicing factor *(EMB2654)
Gene families : OG0035614 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_30580.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_30 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006873 | intracellular monoatomic ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019239 | deaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019725 | cellular homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030003 | intracellular monoatomic cation homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030026 | intracellular manganese ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030151 | molybdenum ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042592 | homeostatic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048878 | chemical homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050801 | monoatomic ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0055071 | manganese ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0055080 | monoatomic cation homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0055082 | intracellular chemical homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 383 | 445 |
| IPR002885 | Pentatricopeptide_rpt | 323 | 372 |
| IPR002885 | Pentatricopeptide_rpt | 207 | 265 |
| IPR002885 | Pentatricopeptide_rpt | 292 | 319 |
| IPR002885 | Pentatricopeptide_rpt | 576 | 599 |
| IPR002885 | Pentatricopeptide_rpt | 152 | 194 |
| IPR002885 | Pentatricopeptide_rpt | 605 | 652 |
| IPR002885 | Pentatricopeptide_rpt | 501 | 549 |
| No external refs found! |