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  5. Lsat_1_v5_gn_9_29121.1

Lsat_1_v5_gn_9_29121.1 (ABAR, CHLH, GUN5, CCH, CCH1)


Aliases : ABAR, CHLH, GUN5, CCH, CCH1

Description : component *(CHLH) of magnesium-chelatase complex. abscisic acid perception modulator *(ABAR)


Gene families : OG0003254 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_29121.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Bra006208 ABAR, CHLH,... abscisic acid perception modulator *(ABAR). component... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03465 ABAR, CHLH,... component *(CHLH) of magnesium-chelatase complex.... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016851 magnesium chelatase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008883 glutamyl-tRNA reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008962 phosphatidylglycerophosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003672 CobN/Mg_chltase 250 1103
IPR003672 CobN/Mg_chltase 1103 1425
IPR022571 Mg_chelatase_H_N 85 246
No external refs found!