Lsat_1_v5_gn_9_14340.1

Description : not classified

Gene families : OG0005344 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005344_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_14340.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006298	mismatch repair	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_rpt	443	491
IPR002885	Pentatricopeptide_rpt	544	592
IPR002885	Pentatricopeptide_rpt	384	407
IPR002885	Pentatricopeptide_rpt	620	643
IPR002885	Pentatricopeptide_rpt	158	182
IPR002885	Pentatricopeptide_rpt	246	264
IPR002885	Pentatricopeptide_rpt	356	382
IPR002885	Pentatricopeptide_rpt	327	351
IPR002885	Pentatricopeptide_rpt	415	439
IPR002885	Pentatricopeptide_rpt	215	239
IPR002885	Pentatricopeptide_rpt	184	212
IPR032867	DYW_dom	760	852
IPR046848	E_motif	662	724

External Links

No external refs found!