1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_9_123421.1

Lsat_1_v5_gn_9_123421.1


Description : substrate adaptor *(InLYP1) of SCF E3 ubiquitin ligase complex


Gene families : OG0035637 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_123421.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_172


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000155 phosphorelay sensor kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004334 fumarylacetoacetase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009439 cyanate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009581 detection of external stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009582 detection of abiotic stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009583 detection of light stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009584 detection of visible light IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051606 detection of stimulus IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 57 88
IPR018392 LysM_dom 129 169
No external refs found!