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  5. Lsat_1_v5_gn_9_118320.1

Lsat_1_v5_gn_9_118320.1


Description : not classified


Gene families : OG0035445 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_118320.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 230 259
IPR046848 E_motif 638 698
IPR002885 Pentatricopeptide_rpt 44 77
IPR002885 Pentatricopeptide_rpt 262 294
IPR002885 Pentatricopeptide_rpt 519 566
IPR002885 Pentatricopeptide_rpt 417 461
IPR002885 Pentatricopeptide_rpt 358 387
IPR002885 Pentatricopeptide_rpt 78 107
IPR002885 Pentatricopeptide_rpt 330 352
IPR002885 Pentatricopeptide_rpt 593 621
IPR002885 Pentatricopeptide_rpt 109 136
IPR002885 Pentatricopeptide_rpt 493 513
IPR002885 Pentatricopeptide_rpt 203 226
IPR002885 Pentatricopeptide_rpt 296 323
IPR002885 Pentatricopeptide_rpt 172 198
IPR002885 Pentatricopeptide_rpt 142 169
No external refs found!