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Description : not classified
Gene families : OG0005295 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005295_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_98221.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_9_104121.1 | ABCB2, PGP2 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016892 | RNA endonuclease activity, producing 3'-phosphomonoesters | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032502 | developmental process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048364 | root development | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048367 | shoot system development | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048731 | system development | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048856 | anatomical structure development | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0099402 | plant organ development | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013581 | PDR_assoc | 57 | 92 |
| No external refs found! |