Lsat_1_v5_gn_8_98160.1 (VCL1, VPS16, EMB258, MAN)

Aliases : VCL1, VPS16, EMB258, MAN

Description : not classified

Gene families : OG0000120 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_98160.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_64

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000775	chromosome, centromeric region	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007059	chromosome segregation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015977	carbon fixation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016984	ribulose-bisphosphate carboxylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045132	meiotic chromosome segregation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098813	nuclear chromosome segregation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1903046	meiotic cell cycle process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006925	Vps16_C	117	181

External Links

No external refs found!