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  5. Lsat_1_v5_gn_8_7441.1

Lsat_1_v5_gn_8_7441.1 (SLK2)


Aliases : SLK2

Description : adapter component *(SEU/SLK) of transcriptional co-repressor complex


Gene families : OG0017921 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_7441.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_127


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003968 RNA-dependent RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043531 ADP binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 278 538
No external refs found!