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  5. Lsat_1_v5_gn_8_5981.1

Lsat_1_v5_gn_8_5981.1 (PSAA)


Aliases : PSAA

Description : not classified


Gene families : OG0001241 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001241_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_5981.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_56


Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEA Interproscan
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0009767 photosynthetic electron transport chain IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016168 chlorophyll binding IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004371 glycerone kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006020 inositol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006066 alcohol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006071 glycerol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008184 glycogen phosphorylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019310 inositol catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019400 alditol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019751 polyol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046164 alcohol catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046174 polyol catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050113 inositol oxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901616 organic hydroxy compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000932 PS_antenna-like 378 594
IPR001280 PSI_PsaA/B 107 339
IPR001280 PSI_PsaA/B 19 106
No external refs found!