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  5. Lsat_1_v5_gn_8_57241.1

Lsat_1_v5_gn_8_57241.1 (GAUT13)


Aliases : GAUT13

Description : RING-H2-class CTL-subclass E3 ubiquitin ligase


Gene families : OG0003360 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003360_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_57241.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_0_1060.1 GAUT14 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005986 sucrose biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008184 glycogen phosphorylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015977 carbon fixation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019203 carbohydrate phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050308 sugar-phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 71 197
No external refs found!