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  5. Lsat_1_v5_gn_8_5201.1

Lsat_1_v5_gn_8_5201.1 (CLPX)


Aliases : CLPX

Description : histone demethylase *(KDM3). unfoldase component *(ClpX) of mitochondrion Clp-type protease complex


Gene families : OG0004509 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_5201.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Bra003063 CLPX unfoldase component *(ClpX) of mitochondrion Clp-type... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra029073 CLPX unfoldase component *(ClpX) of mitochondrion Clp-type... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000155 phosphorelay sensor kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008303 caspase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016255 attachment of GPI anchor to protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016597 amino acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042765 GPI-anchor transamidase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 1372 1576
IPR019489 Clp_ATPase_C 1583 1654
IPR003347 JmjC_dom 934 1031
No external refs found!