Lsat_1_v5_gn_8_48901.1

Description : not classified

Gene families : OG0041527 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_48901.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_193

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004827	proline-tRNA ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006783	heme biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006784	heme A biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006839	mitochondrial transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016653	oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042168	heme metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042255	ribosome assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042256	cytosolic ribosome assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0044877	protein-containing complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046160	heme a metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070569	uridylyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070585	protein localization to mitochondrion	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070925	organelle assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071806	protein transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002677	Ribosomal_bL32	81	126

External Links

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Lsat_1_v5_gn_8_48901.1

Expression Profile

Co-expression Networks

Functional Annotation