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  5. Lsat_1_v5_gn_8_45380.1

Lsat_1_v5_gn_8_45380.1 (PCR11)


Aliases : PCR11

Description : not classified


Gene families : OG0041574 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_45380.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_15


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008172 S-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 37 135
No external refs found!