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  5. Lsat_1_v5_gn_8_42780.1

Lsat_1_v5_gn_8_42780.1


Description : E3 ubiquitin ligase


Gene families : OG0009571 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_42780.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_147


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006081 cellular aldehyde metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043531 ADP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 60 105
IPR022143 DUF3675 111 228
No external refs found!