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  5. Lsat_1_v5_gn_8_30100.1

Lsat_1_v5_gn_8_30100.1 (NTMC2T1.2,...)


Aliases : NTMC2T1.2, NTMC2TYPE1.2, SYT2, ATSYTB, SYTB

Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000292 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_30100.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_187


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004470 malic enzyme activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006825 copper ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016615 malate dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035434 copper ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 247
IPR000008 C2_dom 261 362
IPR000008 C2_dom 419 521
No external refs found!