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  5. Lsat_1_v5_gn_8_20980.1

Lsat_1_v5_gn_8_20980.1


Description : not classified


Gene families : OG0042341 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_20980.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_223


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003919 FMN adenylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004000 adenosine deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005542 folic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006353 DNA-templated transcription termination IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006382 adenosine to inosine editing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016553 base conversion or substitution editing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030151 molybdenum ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0072341 modified amino acid binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006357 HAD-SF_hydro_IIA 41 145
No external refs found!