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  5. Bra007289

Bra007289 (bHLH39, ORG3, BHLH039)


Aliases : bHLH39, ORG3, BHLH039

Description : bHLH-type transcription factor. bHLH-Ib-class transcriptional regulator of copper/iron homeostasis


Gene families : OG0000472 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra007289
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_78


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006308 DNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009092 homoserine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015074 DNA integration IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015706 nitrate transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019346 transsulfuration IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033897 ribonuclease T2 activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050667 homocysteine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098661 inorganic anion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901698 response to nitrogen compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902025 nitrate import IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011598 bHLH_dom 70 122
No external refs found!