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  5. Lsat_1_v5_gn_8_138180.1

Lsat_1_v5_gn_8_138180.1 (EMS1, EXS)


Aliases : EMS1, EXS

Description : not classified


Gene families : OG0000056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_138180.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_137921.1 RLP37, EMB2800, AtRLP37 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009415 response to water IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 336 392
IPR001611 Leu-rich_rpt 25 84
IPR001611 Leu-rich_rpt 249 270
IPR001611 Leu-rich_rpt 129 148
No external refs found!