Lsat_1_v5_gn_8_116001.1


Description : not classified


Gene families : OG0042513 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_116001.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_223


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004834 tryptophan synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006353 DNA-templated transcription termination IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006547 histidine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035596 methylthiotransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050497 alkylthioltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060590 ATPase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!