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  5. Bra007205

Bra007205 (SZF1, TZF11, ATSZF1)


Aliases : SZF1, TZF11, ATSZF1

Description : regulatory factor *(TZF) of mRNA stress granule formation


Gene families : OG0006130 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra007205
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Bra004982 CZF1, TZF10,... regulatory factor *(TZF) of mRNA stress granule formation 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 230 250
IPR002110 Ankyrin_rpt 47 98
No external refs found!