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  5. Lsat_1_v5_gn_7_96961.1

Lsat_1_v5_gn_7_96961.1 (MEF7)


Aliases : MEF7

Description : RNA editing factor *(MEF7)


Gene families : OG0015727 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_96961.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 979 1070
IPR046849 Eplus_motif 948 975
IPR002885 Pentatricopeptide_rpt 760 808
IPR002885 Pentatricopeptide_rpt 244 287
IPR002885 Pentatricopeptide_rpt 660 707
IPR046848 E_motif 885 942
IPR002885 Pentatricopeptide_rpt 835 860
IPR002885 Pentatricopeptide_rpt 454 483
IPR002885 Pentatricopeptide_rpt 142 172
IPR002885 Pentatricopeptide_rpt 321 347
IPR002885 Pentatricopeptide_rpt 633 655
IPR002885 Pentatricopeptide_rpt 426 449
IPR002885 Pentatricopeptide_rpt 114 137
IPR002885 Pentatricopeptide_rpt 353 376
No external refs found!