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  5. Lsat_1_v5_gn_7_8760.1

Lsat_1_v5_gn_7_8760.1


Description : not classified


Gene families : OG0000167 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_8760.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_2141.1 GFR not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_167801.1 PFA4, AtbHLH112 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_12101.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045273 respiratory chain complex II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!