- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ROPGEF5, ATROPGEF5
Description : not classified
Gene families : OG0000980 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000980_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_81620.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_3_25401.1 | UPL4 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_7_80281.1 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0005991 | trehalose metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006497 | protein lipidation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |