Lsat_1_v5_gn_7_67261.1

Description : not classified

Gene families : OG0032711 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_67261.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_191

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	regulatory ncRNA-mediated gene silencing	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003674	molecular_function	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003712	transcription coregulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005956	protein kinase CK2 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006479	protein methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008213	protein alkylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016571	histone methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018022	peptidyl-lysine methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030328	prenylcysteine catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030329	prenylcysteine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034968	histone lysine methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043085	positive regulation of catalytic activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043531	ADP binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0110154	RNA decapping	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0110156	methylguanosine-cap decapping	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902911	protein kinase complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005380	XS_domain	357	490

External Links

No external refs found!

Lsat_1_v5_gn_7_67261.1

Expression Profile

Co-expression Networks

Functional Annotation