- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ACT3
Description : actin filament protein
Gene families : OG0000083 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra007025 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003746 | translation elongation factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006096 | glycolytic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006555 | methionine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006813 | potassium ion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008202 | steroid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015689 | molybdate ion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015698 | inorganic anion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015939 | pantothenate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015940 | pantothenate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016125 | sterol metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016126 | sterol biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031047 | regulatory ncRNA-mediated gene silencing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044183 | protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0070403 | NAD+ binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901702 | salt transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004000 | Actin | 5 | 377 |
| No external refs found! |