Lsat_1_v5_gn_7_48561.1 (ATSNAP29, SNAP29)


Aliases : ATSNAP29, SNAP29

Description : not classified


Gene families : OG0000310 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_48561.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_106180.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 628 818
IPR015410 DUF1985 87 220
No external refs found!