1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_7_48140.1

Lsat_1_v5_gn_7_48140.1 (RMG1)


Aliases : RMG1

Description : effector receptor *(NLR)


Gene families : OG0000255 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_48140.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_5_78281.1 RMG1 regulatory protein *(CBP60) of systemic acquired... 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_7_46620.1 No alias effector receptor *(NLR) 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_7_48240.1 No alias effector receptor *(NLR) 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_61900.1 No alias effector receptor *(NLR) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008318 protein prenyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002182 NB-ARC 194 423
IPR000157 TIR_dom 11 171
No external refs found!