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Aliases : EMB3102, OTP82
Description : RNA editing factor *(OTP82)
Gene families : OG0031591 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_42460.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_61 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003777 | microtubule motor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007017 | microtubule-based process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007018 | microtubule-based movement | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008017 | microtubule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015631 | tubulin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0040008 | regulation of growth | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045927 | positive regulation of growth | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 157 | 178 |
| IPR002885 | Pentatricopeptide_rpt | 392 | 417 |
| IPR002885 | Pentatricopeptide_rpt | 493 | 517 |
| IPR046848 | E_motif | 535 | 597 |
| IPR046849 | Eplus_motif | 602 | 624 |
| IPR032867 | DYW_dom | 633 | 725 |
| IPR002885 | Pentatricopeptide_rpt | 214 | 262 |
| IPR002885 | Pentatricopeptide_rpt | 82 | 131 |
| IPR002885 | Pentatricopeptide_rpt | 420 | 465 |
| IPR002885 | Pentatricopeptide_rpt | 315 | 363 |
| No external refs found! |