Bra006970 (SRPK4)

Aliases : SRPK4

Description : EC_2.7 transferase transferring phosphorus-containing group. SRPK protein kinase

Gene families : OG0003289 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003289_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra006970
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_117

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004057	arginyl-tRNA--protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006665	sphingolipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006672	ceramide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008417	fucosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016559	peroxisome fission	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016598	protein arginylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016832	aldehyde-lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022406	membrane docking	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0032182	ubiquitin-like protein binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0035145	exon-exon junction complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043130	ubiquitin binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048278	vesicle docking	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048285	organelle fission	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051640	organelle localization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0140029	exocytic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0140056	organelle localization by membrane tethering	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR012967	Plant_MeTrfase_dimerisation	507	561
IPR000719	Prot_kinase_dom	42	182
IPR000719	Prot_kinase_dom	270	434

External Links

No external refs found!

Bra006970 (SRPK4)

Expression Profile

Co-expression Networks

Functional Annotation