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Aliases : RLT1, HB-1
Description : component *(RINGLET/RLT) of ISWI chromatin remodeling complex
Gene families : OG0032480 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_22781.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_98 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005048 | signal sequence binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005543 | phospholipid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006914 | autophagy | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008289 | lipid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009056 | catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015693 | magnesium ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016746 | acyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019902 | phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019903 | protein phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030151 | molybdenum ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0033218 | amide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0042277 | peptide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043130 | ubiquitin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045185 | maintenance of protein location | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046923 | ER retention sequence binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051235 | maintenance of location | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051651 | maintenance of location in cell | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901575 | organic substance catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| No external refs found! |