Lsat_1_v5_gn_7_22580.1


Description : not classified


Gene families : OG0008634 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_22580.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_72


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 852 944
IPR002885 Pentatricopeptide_rpt 704 735
IPR002885 Pentatricopeptide_rpt 410 435
IPR002885 Pentatricopeptide_rpt 440 461
IPR002885 Pentatricopeptide_rpt 510 531
IPR046848 E_motif 754 816
IPR002885 Pentatricopeptide_rpt 536 581
IPR002885 Pentatricopeptide_rpt 233 280
IPR002885 Pentatricopeptide_rpt 132 179
IPR002885 Pentatricopeptide_rpt 334 381
IPR002885 Pentatricopeptide_rpt 637 683
IPR019734 TPR_repeat 307 328
No external refs found!