1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_7_15260.1

Lsat_1_v5_gn_7_15260.1


Description : histone demethylase *(KDM3)


Gene families : OG0005143 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_15260.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_193


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032780 negative regulation of ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042030 ATPase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043462 regulation of ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060590 ATPase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 39 104
IPR003406 Glyco_trans_14 768 1023
IPR003347 JmjC_dom 535 629
No external refs found!