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  5. Lsat_1_v5_gn_7_108681.1

Lsat_1_v5_gn_7_108681.1 (ATRBP45C)


Aliases : ATRBP45C

Description : regulatory factor *(RBP45/47) of mRNA stress granule formation


Gene families : OG0008565 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_108681.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_228


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004652 obsolete polynucleotide adenylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043531 ADP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043631 obsolete RNA polyadenylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 185 253
IPR000504 RRM_dom 304 368
IPR000504 RRM_dom 92 159
No external refs found!