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  5. Lsat_1_v5_gn_7_108000.1

Lsat_1_v5_gn_7_108000.1 (TIC)


Aliases : TIC

Description : 2S albumin seed storage protein *(SESA)


Gene families : OG0000979 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_108000.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_7_106501.1 No alias 2S albumin seed storage protein *(SESA) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_65721.1 NRPD2A, DMS2,... 2S albumin seed storage protein *(SESA) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009512 cytochrome b6f complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 72 167
No external refs found!