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  5. Lsat_1_v5_gn_6_98720.1

Lsat_1_v5_gn_6_98720.1


Description : regulatory protein *(RLD) of gravity sensing


Gene families : OG0009430 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_98720.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_7


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030906 retromer, cargo-selective complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 624 690
IPR027988 BRX_N 867 899
IPR001849 PH_domain 15 123
IPR000408 Reg_chr_condens 349 401
IPR000408 Reg_chr_condens 405 453
IPR000408 Reg_chr_condens 467 514
IPR000408 Reg_chr_condens 298 346
IPR000408 Reg_chr_condens 522 568
IPR000408 Reg_chr_condens 573 619
IPR013591 Brevis_radix_dom 1030 1085
No external refs found!