Lsat_1_v5_gn_6_9620.1 (AHL1, ATAHL1)

Aliases : AHL1, ATAHL1

Description : AHL clade-B transcription factor

Gene families : OG0005358 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005358_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_9620.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_199

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003916	DNA topoisomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004527	exonuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005984	disaccharide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005985	sucrose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006265	DNA topological change	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016157	sucrose synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016459	myosin complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071103	DNA conformation change	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR017956	AT_hook_DNA-bd_motif	74	85
IPR005175	PPC_dom	153	266

External Links

No external refs found!