- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface
Gene families : OG0001292 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001292_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_94140.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_167 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004650 | polygalacturonase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005484 | SNAP receptor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015689 | molybdate ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015698 | inorganic anion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030674 | protein-macromolecule adaptor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0060090 | molecular adaptor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901702 | salt transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000535 | MSP_dom | 10 | 112 |
| No external refs found! |