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Aliases : MEF18
Description : RNA editing factor *(MEF18)
Gene families : OG0039303 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_90800.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 89 | 108 |
| IPR002885 | Pentatricopeptide_rpt | 592 | 616 |
| IPR002885 | Pentatricopeptide_rpt | 486 | 508 |
| IPR002885 | Pentatricopeptide_rpt | 249 | 278 |
| IPR002885 | Pentatricopeptide_rpt | 517 | 541 |
| IPR002885 | Pentatricopeptide_rpt | 221 | 248 |
| IPR002885 | Pentatricopeptide_rpt | 555 | 581 |
| IPR002885 | Pentatricopeptide_rpt | 117 | 145 |
| IPR046848 | E_motif | 634 | 695 |
| IPR002885 | Pentatricopeptide_rpt | 146 | 192 |
| IPR002885 | Pentatricopeptide_rpt | 409 | 455 |
| No external refs found! |