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  5. Lsat_1_v5_gn_6_82540.1

Lsat_1_v5_gn_6_82540.1


Description : not classified


Gene families : OG0038780 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_82540.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_82


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000151 ubiquitin ligase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005544 calcium-dependent phospholipid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005548 phospholipid transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009092 homoserine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015914 phospholipid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019346 transsulfuration IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050667 homocysteine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051179 localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 310 346
IPR001680 WD40_rpt 351 387
IPR001680 WD40_rpt 486 521
IPR001680 WD40_rpt 216 248
No external refs found!