Heatmap: Cluster_82 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- - - - 0.15 0.68 -2.73 -1.44 -1.51 -1.82 -4.32 -1.99 -0.62 2.46 2.3 0.59 -1.28 2.27 0.09 -3.58 -0.21 -3.46 2.1 -1.88 -1.9 -2.57 -1.38 -4.39 -1.82 -1.15 -0.48
- - -0.42 - -1.41 -3.24 - - -1.17 -1.34 -1.28 -1.32 -2.71 2.99 0.78 -2.87 -1.25 1.53 0.09 -0.27 -0.38 - 3.35 -0.53 -3.12 - -2.81 -3.36 -1.54 -2.11 -1.32
-0.44 -1.28 0.05 -0.12 0.2 -0.07 -0.66 -1.04 -0.74 -0.83 -0.65 -0.54 -1.0 2.0 1.08 -0.91 -0.95 0.82 0.08 -1.03 -0.71 -0.7 2.33 -0.89 -0.7 -0.79 -0.96 -0.66 -0.81 -0.86 -0.1
-0.67 -1.11 -1.77 -1.96 -0.33 -0.05 -0.02 0.09 -0.8 -0.96 -0.63 -0.95 -0.26 1.49 1.31 -0.14 -0.16 1.72 0.48 -0.32 -0.54 -0.56 1.48 -0.38 -0.44 -0.61 -0.37 -0.62 -0.18 -0.57 -0.76
-2.91 -1.18 -1.67 -1.31 0.66 0.4 -0.88 -1.4 -1.16 -0.87 -0.49 -0.48 0.03 2.23 1.14 -0.23 -0.27 0.86 0.01 -0.42 -0.57 -2.26 1.76 -0.07 -0.32 -0.61 -0.88 -1.47 -0.82 -0.15 0.32
-1.0 -0.84 -1.03 -1.06 0.33 0.44 -0.04 -0.49 -0.85 -1.03 -0.78 -0.96 -0.1 1.53 0.73 -0.14 -0.3 0.88 -0.23 -0.7 -0.48 -0.78 1.91 -0.38 -0.41 -0.34 -0.32 -0.96 0.03 -0.11 0.49
-1.99 -1.47 -1.6 -2.0 -0.11 0.12 -1.24 -1.24 -0.97 -1.2 -1.28 -1.04 -0.16 2.36 1.36 -0.48 -0.53 1.65 0.13 -0.79 -1.05 -0.91 1.93 -0.58 -0.97 -1.07 -0.9 -1.13 -0.13 -0.21 0.05
-0.56 -0.47 -0.87 -0.86 0.63 0.53 -0.5 -0.71 -0.8 -0.72 -0.36 -1.06 -0.26 1.44 0.86 -0.22 -0.39 0.98 -0.11 -0.36 -0.42 -0.36 1.66 -0.5 -0.39 -0.25 -0.54 -0.61 0.16 -0.3 -0.28
-0.46 -0.76 -1.43 -2.29 -1.12 -0.05 0.4 0.16 -1.02 -1.18 -1.08 -1.02 -0.32 1.9 1.05 -0.16 -0.52 -0.51 0.01 -0.43 -0.41 -0.21 2.21 -0.36 -0.65 -0.3 -0.45 -0.02 0.23 -0.28 -0.96
-0.42 -1.43 -4.09 -3.07 0.31 1.0 -0.67 -0.14 -1.82 -1.43 -1.15 -1.97 0.4 1.98 1.03 -1.15 -2.06 1.74 -0.04 -1.24 -0.96 -0.37 2.1 -0.24 -0.48 -0.65 -0.28 -1.07 -0.24 -1.22 -0.97
-1.22 -0.59 -1.27 -1.83 1.05 0.59 -1.17 -1.3 -1.48 -1.98 -1.28 -2.43 -1.26 2.36 1.33 -1.41 -2.39 1.87 0.07 -1.99 -1.66 -1.23 2.39 -1.03 -1.77 -1.32 -1.42 -1.31 0.06 -0.77 -1.22
-4.55 -1.2 -2.22 - -0.05 -0.42 -2.12 -0.95 -0.93 -2.68 -0.75 -5.12 2.13 2.41 0.13 -3.61 -2.98 0.21 -0.74 -1.22 -1.78 -1.21 2.99 -1.73 -2.16 -0.85 -1.95 -3.05 -0.46 -0.46 0.84
-0.45 -0.86 -0.55 -0.42 0.8 0.57 -1.49 -1.92 -1.11 -1.02 -0.86 -1.46 -0.67 1.9 0.88 -0.58 -1.37 1.49 -0.11 -1.35 -0.96 -0.93 2.31 -0.93 -0.92 -0.92 -0.69 -1.33 -0.1 -0.5 -0.06
-0.09 0.15 -0.09 -1.06 -0.34 0.25 -1.78 -1.43 -2.13 -1.39 -2.8 -2.53 -0.95 3.05 -0.09 -1.96 -1.95 1.71 -1.0 -1.7 -2.09 -1.33 2.64 -2.63 -1.16 -1.09 -0.97 -1.34 -1.94 -2.05 -2.0
-1.8 -1.12 -2.16 -2.22 -0.07 0.09 0.29 0.0 -0.95 -2.08 -0.55 -1.26 -0.59 2.18 1.79 -0.96 -0.77 1.84 -0.0 -0.62 -0.68 -0.41 1.53 -0.37 -1.41 -0.65 -0.52 -0.79 -1.07 -1.0 -1.23
-0.37 -0.69 -0.87 -1.07 0.14 0.0 -0.45 -0.67 -0.51 -0.39 -0.32 -0.29 0.12 0.92 0.83 0.06 0.04 0.82 0.25 -0.02 -0.09 -0.06 0.82 -0.08 -0.13 -0.1 -0.17 0.03 -0.03 -0.19 0.08
-2.04 -3.65 -4.76 -5.75 -0.56 0.44 -1.12 -0.44 -2.61 -3.17 -2.45 -3.09 -0.13 2.83 1.67 -1.24 -1.62 1.67 0.69 -1.68 -1.32 -1.09 2.55 -1.06 -1.29 -1.36 -1.15 -1.53 -0.81 -1.86 -3.38
-4.05 -4.24 -5.19 -7.02 -2.19 -0.88 -1.2 -0.86 -3.85 -3.74 -2.8 -4.08 -0.69 3.3 1.84 -2.01 -1.86 1.49 -0.47 -2.65 -2.77 -2.4 3.0 -2.26 -1.9 -2.17 -1.97 -2.62 -1.18 -1.31 -2.35
- - - - -2.51 -2.23 - - -3.21 -2.17 -1.93 - -1.01 3.18 0.66 - - 1.93 -0.97 -1.0 - - 3.34 0.27 -0.49 -0.47 - -1.08 -2.7 - -0.51
-2.97 -2.62 -2.5 -2.04 0.12 -0.85 -1.78 -1.52 -1.3 -1.28 -1.04 -1.36 -0.63 2.67 1.79 -0.69 -1.13 0.79 -1.29 -1.34 -1.7 -1.76 2.85 -1.39 -1.38 -1.54 -1.23 -2.38 -0.38 -0.11 0.02
0.02 -0.56 -0.84 -1.43 -0.58 -0.09 0.08 0.1 -0.36 -0.36 -0.21 -0.34 -0.25 1.86 1.05 -0.38 -0.39 0.6 0.25 -0.35 -0.52 -0.45 1.46 -0.41 -0.53 -0.48 -0.47 -0.48 -0.29 -0.39 -1.0
-0.14 -0.75 -1.02 -1.35 0.34 0.63 -0.31 -0.5 -0.57 -0.86 -0.42 -0.62 0.39 1.54 0.83 -0.06 -0.61 0.82 0.05 -0.75 -0.63 -0.33 1.2 -0.34 -0.38 -0.31 -0.08 -0.35 -0.03 -0.35 0.07
-0.52 -0.52 -0.45 -0.29 0.29 0.15 -0.18 -0.53 -0.62 -0.55 -0.53 -0.65 -0.23 1.48 0.7 -0.25 -0.37 1.21 -0.12 -0.49 -0.33 -0.39 1.53 -0.65 -0.54 -0.52 -0.51 -0.35 -0.01 -0.27 -0.16
-0.46 -0.7 -1.18 -1.37 0.4 0.78 -0.1 -0.03 -0.71 -0.9 -0.59 -1.18 -0.58 1.36 0.83 -0.28 -0.7 1.02 0.11 -0.54 -0.2 -0.14 1.53 -0.34 -0.28 -0.32 -0.22 -0.36 -0.02 -0.26 -0.24
-1.1 -1.52 -2.31 -2.39 0.58 0.38 -0.82 -0.63 -1.19 -1.31 -0.88 -1.09 -0.51 2.06 1.39 -0.52 -0.9 2.06 0.2 -1.04 -0.89 -0.74 1.59 -0.6 -0.91 -0.89 -1.08 -0.61 -0.29 -0.61 -0.11
-0.19 -0.6 -0.68 -0.67 0.11 0.3 -0.51 -0.31 -0.43 -0.52 -0.34 -0.34 0.26 0.9 0.53 -0.2 -0.19 0.56 0.02 -0.29 -0.2 -0.09 1.42 -0.08 -0.15 -0.29 -0.12 -0.13 -0.05 -0.18 -0.02
-2.04 -1.06 -2.53 -2.56 0.65 0.85 -0.25 0.01 -0.65 -0.74 -0.14 -0.82 -0.77 1.55 1.35 -0.01 -0.69 1.78 0.78 -0.36 -0.48 -0.55 1.35 -0.56 -0.85 -0.82 -0.9 -1.0 -0.52 -0.8 -1.56
-2.54 -1.89 -0.53 -1.13 -0.39 0.47 -0.4 -0.81 -2.45 -0.16 -0.58 -0.21 -0.36 2.21 1.11 0.09 -0.76 -1.28 -0.96 -1.23 -0.81 -0.85 2.73 -1.16 -1.35 -0.38 -0.83 -1.43 0.08 -1.3 -0.03
- -2.11 -0.79 - 0.29 -1.14 -2.44 - -0.79 - -3.35 - -0.93 2.58 0.59 -3.31 -2.54 2.15 0.07 -2.07 -1.96 - 3.54 - -0.67 -3.44 - -2.5 -1.94 -3.56 -0.94
-0.21 0.09 -0.53 -0.93 0.69 0.34 -1.0 -1.55 -0.94 -1.19 -0.73 -1.37 -0.56 1.78 1.1 -0.3 -1.07 1.5 -0.36 -1.24 -1.19 -1.06 2.04 -1.03 -1.03 -1.0 -0.89 -1.15 0.1 0.01 0.01
0.01 -0.29 -0.57 -0.95 0.12 0.4 -0.4 -0.11 -0.65 -0.63 -0.52 -0.49 0.21 1.29 0.79 -0.08 -0.3 0.56 0.22 -0.48 -0.35 -0.28 1.35 -0.31 -0.33 -0.31 -0.3 -0.2 -0.17 -0.49 -0.12
-0.61 -0.53 -0.86 -1.1 0.76 0.19 -1.12 -1.03 -1.14 -1.01 -0.8 -0.95 -0.0 2.0 1.4 -0.0 -0.32 1.46 -0.31 -1.19 -0.84 -0.74 1.76 -1.22 -0.97 -0.8 -0.86 -0.97 -0.2 -0.45 -0.6
-1.1 -1.2 -2.26 -2.73 0.01 0.66 -0.19 0.34 -1.51 -1.58 -1.44 -1.74 -0.09 1.63 0.92 -0.1 -0.55 1.19 0.0 -0.9 -0.6 -0.51 2.44 -0.52 -0.5 -0.63 -0.44 -0.79 -0.38 -0.49 -0.56
-0.2 -0.46 0.0 -0.13 0.39 0.39 -0.5 -0.72 -0.67 -0.34 -0.46 -0.33 -0.33 1.09 0.48 -0.04 -0.46 0.84 -0.02 -0.52 -0.32 -0.25 1.11 -0.53 -0.43 -0.18 -0.2 -0.34 0.21 0.13 0.14
-0.62 -0.85 -0.89 -0.95 0.24 0.45 -0.59 -0.24 -0.76 -0.69 -0.54 -0.87 -0.02 1.54 0.75 -0.35 -0.56 1.18 -0.04 -0.82 -0.54 -0.54 2.02 -0.53 -0.54 -0.53 -0.47 -0.81 -0.05 -0.29 -0.3
-0.25 -0.44 -0.82 -0.73 0.14 0.2 -0.27 -0.37 -0.67 -0.58 -0.66 -0.54 0.31 1.17 0.69 -0.23 -0.28 0.59 0.05 -0.32 -0.31 -0.2 1.54 -0.32 -0.41 -0.47 -0.37 -0.26 0.17 -0.07 0.1
-0.39 -0.35 -0.35 0.02 0.43 0.29 -0.5 -0.53 -0.76 -0.7 -0.26 -0.49 -0.25 1.11 0.6 -0.11 -0.27 1.02 0.03 -0.41 -0.07 -0.54 1.16 -0.47 -0.45 -0.35 -0.13 -0.47 0.17 -0.03 -0.0
-0.39 -0.4 -0.92 -1.17 0.05 0.52 -0.44 -0.41 -0.91 -1.16 -0.78 -1.14 -0.18 1.37 0.82 0.04 -0.51 0.9 -0.01 -0.82 -0.59 -0.53 2.12 -0.64 -0.57 -0.5 -0.42 -0.87 0.22 -0.01 -0.02
-0.99 -0.58 -0.82 -0.79 0.23 0.41 -0.28 -0.18 -1.13 -1.11 -1.07 -1.24 0.02 1.45 1.03 -0.15 -0.59 1.09 -0.11 -0.99 -0.72 -0.59 2.3 -0.56 -0.65 -0.88 -0.44 -0.68 0.0 -0.46 -0.75
-1.76 -1.6 -2.33 -2.38 0.73 0.33 -1.73 -1.78 -1.41 -1.46 -1.48 -1.51 -0.36 2.44 1.36 -0.83 -1.5 2.29 -0.36 -1.61 -1.35 -1.2 2.1 -1.51 -1.21 -1.18 -1.3 -1.57 -0.16 -0.41 -0.68
-0.2 0.64 -0.35 -0.06 0.24 0.27 -0.25 -0.87 -1.45 -1.14 -1.01 -0.99 0.05 2.22 1.08 -0.96 -1.19 0.13 -0.06 -1.31 -1.18 -1.11 2.33 -0.87 -0.72 -1.07 -0.84 -0.4 -1.88 -2.38 -0.57
-1.51 -0.52 -2.45 -1.11 0.05 -0.15 -0.75 -1.54 -0.58 -0.98 -0.52 -0.45 0.39 1.96 1.13 -0.7 -0.73 0.16 0.4 -0.11 -0.74 -0.47 1.7 -0.24 -0.47 -0.58 -0.59 -0.32 -0.17 -0.12 0.83
-2.44 -1.93 -1.79 -1.82 0.22 -0.01 -1.78 -1.92 -1.43 -1.5 -1.23 -1.87 0.37 2.15 1.44 -0.64 -0.8 1.31 0.07 -1.24 -1.08 -1.31 2.59 -1.43 -1.27 -1.21 -1.79 -1.75 0.05 -0.64 0.88
-1.42 -1.24 -1.81 -1.51 0.48 0.32 -1.15 -1.52 -1.36 -1.53 -1.33 -1.63 -0.86 2.16 1.49 -0.63 -1.31 1.85 -0.88 -1.37 -1.05 -1.22 2.65 -1.3 -1.32 -1.1 -1.08 -1.35 -0.55 -0.78 -0.64
-0.68 -0.33 -3.59 -2.59 -1.23 0.13 -0.58 0.13 -4.09 -4.07 -1.68 -5.56 -0.69 2.03 0.96 -1.52 -0.94 2.34 -1.61 -2.53 -1.52 -0.42 2.8 -4.66 -1.09 -0.66 -2.04 -0.28 0.38 -0.54 -2.14
-0.36 -0.37 -1.0 -1.41 0.7 0.66 -0.75 -0.62 -0.54 -0.99 -0.3 -1.02 -0.85 1.75 1.45 0.1 -0.69 0.99 0.04 -0.72 -0.66 -0.53 1.68 -0.68 -0.73 -0.71 -0.34 -0.93 -0.37 -0.5 -0.97
-2.0 -1.68 -1.12 -1.08 -0.11 -0.46 -1.07 -1.25 -0.53 -0.5 -0.23 -0.71 -0.63 2.11 0.93 -0.58 -0.68 0.85 0.34 -0.22 -0.52 -0.7 1.67 -0.55 -0.59 -0.5 0.08 -1.33 0.33 0.15 0.71
-0.79 -1.8 -3.23 -3.06 0.07 0.28 -1.15 -0.63 -0.52 -0.76 -0.36 -0.68 0.1 1.19 0.96 -0.27 -0.39 0.9 0.39 -0.2 -0.35 -0.22 2.37 0.03 -0.47 -0.56 -0.53 -0.2 -0.17 -0.63 -0.78
-0.6 -1.05 -1.41 -1.42 0.3 -0.09 -0.28 -0.23 -0.58 -0.54 -0.34 -0.31 -0.34 1.26 0.92 0.06 0.09 1.1 0.56 -0.3 -0.32 -0.33 1.26 -0.28 -0.37 -0.25 -0.33 -0.38 -0.04 -0.16 -0.27
-1.05 -0.68 -1.01 -1.17 0.62 0.52 -0.65 -0.61 -0.49 -0.52 -0.28 -0.63 -0.16 1.54 0.81 -0.35 -0.63 1.46 -0.11 -0.79 -0.55 -0.34 1.45 -0.88 -0.51 -0.44 -0.47 -0.72 0.34 -0.14 -0.18
-0.56 -0.53 -0.62 -0.48 0.28 0.46 -0.21 -0.06 -0.34 -0.31 -0.24 -0.57 0.02 1.07 0.73 -0.06 -0.22 0.56 -0.08 -0.41 -0.14 -0.06 0.96 -0.3 -0.37 -0.24 -0.09 -0.27 0.11 -0.06 -0.12
-1.88 -3.32 -2.91 -1.91 0.14 -0.08 -2.22 -1.77 -1.61 -1.84 -0.92 -2.14 -1.61 2.17 1.17 -1.36 -1.95 2.43 -0.79 -1.47 -1.14 -1.29 2.76 -1.04 -1.56 -0.58 -0.77 -2.05 -0.33 -0.77 -0.15
-1.57 -2.37 - -1.95 0.35 0.2 -2.13 - -1.18 -3.34 -4.1 -1.75 0.72 2.84 1.26 -0.63 -1.16 2.38 -0.42 -1.26 -3.48 -1.69 2.43 -3.36 -4.26 -1.01 - -1.46 -2.36 - -0.01
-0.29 -0.47 -0.23 0.07 -0.07 0.08 -0.51 -0.34 -0.45 -0.44 -0.34 -0.42 0.38 1.69 -0.0 -0.31 -0.37 -0.4 -0.4 -0.68 -0.64 -0.51 1.87 -0.48 -0.43 -0.49 -0.61 -0.37 -0.17 -0.07 0.43
-0.54 -0.35 -1.01 -0.96 0.88 0.42 -0.91 -0.29 -0.78 -0.97 -0.83 -0.79 -0.48 1.91 0.98 -0.64 -1.14 1.36 -0.0 -1.19 -0.91 -0.65 2.0 -0.84 -0.99 -0.96 -0.83 -0.98 -0.02 -0.57 -0.46
-0.45 -0.41 -0.59 -0.76 0.34 0.42 -0.03 -0.02 -0.48 -0.67 -0.4 -0.67 -0.45 0.95 0.94 -0.03 -0.49 1.3 0.26 -0.43 -0.13 -0.36 0.78 -0.26 -0.37 -0.25 -0.41 -0.21 0.05 -0.28 -0.05
-1.84 -1.2 -0.97 -1.15 -0.05 0.47 -0.54 -0.73 -0.56 -0.68 -0.85 -0.82 -0.65 1.71 1.27 -0.24 -0.38 1.75 0.33 -0.47 -0.47 -0.58 1.41 -0.73 -0.86 -0.58 -0.58 -1.38 0.21 -0.26 0.12
-0.77 -0.79 -0.74 -0.85 0.37 0.49 -0.66 -0.65 -1.04 -1.04 -0.84 -0.96 -0.46 1.94 1.35 -0.36 -0.73 0.75 -0.05 -1.08 -0.79 -0.78 2.26 -0.91 -0.92 -0.91 -0.78 -1.05 -0.21 -0.43 -0.29
-1.51 -1.76 -1.94 -1.17 0.74 0.49 -0.8 -1.14 -1.03 -0.9 -0.97 -1.43 -0.81 1.67 1.08 -0.22 -0.75 1.79 0.13 -1.07 -0.7 -0.4 1.95 -0.73 -0.63 -0.46 -0.38 -1.06 -0.16 -0.27 0.12
-2.07 -1.51 -1.94 -1.42 0.57 0.2 -1.63 -1.55 -1.06 -1.16 -0.82 -1.31 -0.65 2.61 1.58 -0.63 -1.14 1.34 -0.2 -1.19 -1.25 -1.23 2.16 -1.2 -1.14 -1.33 -1.06 -1.6 -0.28 -0.4 -0.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.