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  5. Lsat_1_v5_gn_6_73221.1

Lsat_1_v5_gn_6_73221.1


Description : not classified


Gene families : OG0039422 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_73221.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_72


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 336 386
IPR002885 Pentatricopeptide_rpt 14 61
IPR002885 Pentatricopeptide_rpt 90 113
IPR002885 Pentatricopeptide_rpt 121 147
IPR002885 Pentatricopeptide_rpt 194 220
IPR032867 DYW_dom 434 526
IPR002885 Pentatricopeptide_rpt 242 304
No external refs found!