Lsat_1_v5_gn_6_69640.1 (CRSH, ATCRSH)

Aliases : CRSH, ATCRSH

Description : ppGpp synthetase *(CRSH)

Gene families : OG0038905 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_69640.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_225

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004357	glutamate-cysteine ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016307	obsolete phosphatidylinositol phosphate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016881	acid-amino acid ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019915	lipid storage	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030906	retromer, cargo-selective complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007685	RelA_SpoT	323	445
IPR002048	EF_hand_dom	491	543

External Links

No external refs found!

Lsat_1_v5_gn_6_69640.1 (CRSH, ATCRSH)

Expression Profile

Co-expression Networks

Functional Annotation