Lsat_1_v5_gn_6_6520.1


Description : not classified


Gene families : OG0039144 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_6520.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_23


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004506 squalene monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007266 Rho protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009606 tropism IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR021916 DUF3527 254 367
IPR021916 DUF3527 369 534
No external refs found!