Lsat_1_v5_gn_6_6481.1 (AIPP3, RVR1, BDT1)

Aliases : AIPP3, RVR1, BDT1

Description : regulatory component *(AIPP3) of chromatin silencing regulator complex

Gene families : OG0002448 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002448_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_6481.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_68

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004334	fumarylacetoacetase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005956	protein kinase CK2 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006364	rRNA processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009072	aromatic amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016072	rRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044085	cellular component biogenesis	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902911	protein kinase complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001025	BAH_dom	123	241
IPR003618	TFIIS_cen_dom	343	463

External Links

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Lsat_1_v5_gn_6_6481.1 (AIPP3, RVR1, BDT1)

Expression Profile

Co-expression Networks

Functional Annotation